rna_code.data package

Subpackages

• rna_code.data.data_module package
  • Submodules
  • rna_code.data.data_module.brca_data_module module
  • rna_code.data.data_module.cptac_3_data_module module
  • rna_code.data.data_module.data_module module
  • Module contents
• rna_code.data.feature_selection package
  • Submodules
  • rna_code.data.feature_selection.base_feature_selector module
    • BaseFeatureSelector
      • BaseFeatureSelector.select_features()
  • rna_code.data.feature_selection.expression_selector module
    • ExpressionSelector
      • ExpressionSelector.select_features()
  • rna_code.data.feature_selection.laplacian_selector module
    • LaplacianSelector
      • LaplacianSelector.laplacian_score()
      • LaplacianSelector.select_features()
  • rna_code.data.feature_selection.lasso_selector module
    • LassoSelector
      • LassoSelector.select_features()
  • rna_code.data.feature_selection.mad_selector module
    • MADSelector
      • MADSelector.select_features()
  • Module contents
• rna_code.data.interface package
  • Submodules
  • rna_code.data.interface.BRCA_interface module
    • BRCAInterface
      • BRCAInterface.entry_names
      • BRCAInterface.find_subtypes()
      • BRCAInterface.load_patients()
      • BRCAInterface.setup()
  • rna_code.data.interface.base_interface module
    • BaseInterface
      • BaseInterface.get_gene_names_from_file()
      • BaseInterface.load_patient_data()
      • BaseInterface.retrieve_position()
  • rna_code.data.interface.cptac_3_interface module
    • CPTAC3Interface
      • CPTAC3Interface.entry_names
      • CPTAC3Interface.find_subtypes()
      • CPTAC3Interface.load_patients()
      • CPTAC3Interface.setup()
  • Module contents

Submodules

rna_code.data.dataset_builder module

Module contents